Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | CKY39_RS10255 | Not Available | Positive | 2258386 - 2259393 | 36644.1 |
| sensor histidine kinase | CKY39_RS10260 | Not Available | Positive | 2259485 - 2261320 | 65896.2 |
| sigma-54-dependent transcriptional regulator | CKY39_RS10265 | Not Available | Positive | 2261317 - 2262678 | 50415.9 |
| putative ig domain-containing protein | CKY39_RS10275 | Not Available | Positive | 2263210 - 2265129 | 63096.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34190 | Not Available | Positive | 2265182 - 2265387 | 7722.42 |
| lysr family transcriptional regulator | CKY39_RS10280 | Not Available | Negative | 2265611 - 2266570 | 34799.1 |
| rraa family protein | CKY39_RS10285 | Not Available | Positive | 2266669 - 2267340 | 23173.4 |
| amidase | CKY39_RS10290 | Not Available | Positive | 2267337 - 2268737 | 49347.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10295 | Not Available | Positive | 2268788 - 2269765 | 34120.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10300 | Not Available | Positive | 2269904 - 2270875 | 34212.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
