Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | CKY39_RS10205 | Not Available | Positive | 2245970 - 2246770 | 28863.4 |
| nadp-dependent malic enzyme | CKY39_RS10210 | Not Available | Positive | 2246790 - 2249075 | 81224.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS10215 | Not Available | Positive | 2249119 - 2250036 | 33481.2 |
| dicarboxylate/amino acid:cation symporter | CKY39_RS10220 | Not Available | Positive | 2250055 - 2251398 | 47850.9 |
| nad(p)/fad-dependent oxidoreductase | CKY39_RS10225 | Not Available | Positive | 2251418 - 2252752 | 48402.4 |
| pha/phb synthase family protein | CKY39_RS10230 | Not Available | Positive | 2252765 - 2254234 | 52544.8 |
| acetyl-coa c-acetyltransferase | CKY39_RS10235 | Not Available | Positive | 2254289 - 2255473 | 40284.8 |
| acetoacetyl-coa reductase | CKY39_RS10240 | Not Available | Positive | 2255520 - 2256269 | 26332.8 |
| duf6781 family protein | CKY39_RS10245 | Not Available | Positive | 2256280 - 2256933 | 22967.8 |
| cytochrome ubiquinol oxidase subunit i | CKY39_RS10250 | Not Available | Positive | 2256980 - 2258389 | 51634.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
