Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 84): actaactgcaaacgacga | Not Available | Not Available | Positive | 2233813 - 2234196 | Not Available |
| tyrosine-type recombinase/integrase | CKY39_RS10160 | Not Available | Positive | 2234404 - 2235567 | 43466.4 |
| hypothetical protein | CKY39_RS10165 | Not Available | Positive | 2235527 - 2235895 | 13262.4 |
| hypothetical protein | CKY39_RS10170 | Not Available | Positive | 2235921 - 2236214 | 10825.3 |
| hypothetical protein | CKY39_RS10175 | Not Available | Positive | 2237014 - 2237379 | 14275.7 |
| hypothetical protein | CKY39_RS33220 | Not Available | Negative | 2237571 - 2238287 | 25407.9 |
| lysr family transcriptional regulator | CKY39_RS10185 | Not Available | Positive | 2238682 - 2239575 | 33192.3 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | CKY39_RS10190 | Not Available | Positive | 2239912 - 2242584 | 99641.7 |
| dihydrolipoyllysine-residue acetyltransferase | CKY39_RS10195 | Not Available | Positive | 2242598 - 2244193 | 55065.5 |
| dihydrolipoyl dehydrogenase | CKY39_RS10200 | Not Available | Positive | 2244207 - 2245961 | 60814.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
