Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | CKY39_RS10105 | Not Available | Negative | 2221032 - 2222720 | 61869.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS10110 | Not Available | Negative | 2222954 - 2224971 | 69780.4 |
| prephenate dehydrogenase | CKY39_RS10115 | Not Available | Negative | 2224973 - 2225866 | 31383.6 |
| prephenate dehydratase | CKY39_RS10120 | Not Available | Negative | 2225885 - 2227003 | 40144.9 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | CKY39_RS10125 | Not Available | Negative | 2227028 - 2228158 | 40703.4 |
| duf2059 domain-containing protein | CKY39_RS10130 | Not Available | Negative | 2228165 - 2228752 | 20896.4 |
| dna gyrase subunit a | CKY39_RS10135 | Not Available | Negative | 2228749 - 2231394 | 98094.2 |
| outer membrane protein ompa | CKY39_RS10140 | Not Available | Positive | 2231619 - 2232269 | 22810.2 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | CKY39_RS10145 | Not Available | Positive | 2232398 - 2233126 | 26594.0 |
| had family hydrolase | CKY39_RS10150 | Not Available | Positive | 2233123 - 2233800 | 24093.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
