Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | CKY39_RS31350 | Not Available | Negative | 6779693 - 6780805 | 40278.0 |
| hypothetical protein | CKY39_RS31355 | Not Available | Negative | 6780815 - 6781420 | 21576.5 |
| Putative phage dna-binding protein | CKY39_RS31360 | Not Available | Negative | 6781508 - 6781849 | 12037.2 |
| Gp11 | CKY39_RS31365 | Not Available | Positive | 6782203 - 6782421 | 8207.84 |
| Hypothetical protein | CKY39_RS31370 | Not Available | Positive | 6782468 - 6782677 | 7838.41 |
| Putative phage transcriptional activator ogr/delta | CKY39_RS34935 | Not Available | Positive | 6782674 - 6783069 | 14398.1 |
| hypothetical protein | CKY39_RS31380 | Not Available | Positive | 6783180 - 6783797 | 22307.6 |
| hypothetical protein | CKY39_RS31385 | Not Available | Positive | 6783802 - 6784164 | 13760.5 |
| Gp15, hypothetical replication protein | CKY39_RS31390 | Not Available | Positive | 6784172 - 6787069 | 106955.0 |
| hypothetical protein | CKY39_RS33585 | Not Available | Positive | 6787066 - 6787323 | 9379.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
