Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter subunit c | CKY39_RS10055 | Not Available | Negative | 2211786 - 2212136 | 12398.5 |
| monovalent cation/h+ antiporter subunit a | CKY39_RS10060 | Not Available | Negative | 2212136 - 2215102 | 107060.0 |
| fluoride efflux transporter crcb | CKY39_RS10065 | Not Available | Negative | 2215180 - 2215566 | 13059.6 |
| trap transporter large permease | CKY39_RS10070 | Not Available | Negative | 2215592 - 2216905 | 47039.3 |
| trap transporter small permease | CKY39_RS10075 | Not Available | Negative | 2216928 - 2217461 | 19612.1 |
| trap transporter substrate-binding protein | CKY39_RS10080 | Not Available | Negative | 2217465 - 2218433 | 34634.5 |
| comea family dna-binding protein | CKY39_RS10085 | Not Available | Negative | 2218596 - 2218928 | 11349.8 |
| lipopolysaccharide assembly protein lapb | CKY39_RS10090 | Not Available | Negative | 2219066 - 2220253 | 44044.7 |
| lipopolysaccharide assembly lapa domain-containing protein | CKY39_RS10095 | Not Available | Negative | 2220243 - 2220578 | 11744.4 |
| integration host factor subunit beta | CKY39_RS10100 | Not Available | Negative | 2220625 - 2220951 | 11949.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
