Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | CKY39_RS10005 | Not Available | Negative | 2203293 - 2204360 | 38386.0 |
| gnat family n-acetyltransferase | CKY39_RS10010 | Not Available | Negative | 2204373 - 2205209 | 29162.3 |
| nad-dependent epimerase/dehydratase family protein | CKY39_RS10015 | Not Available | Negative | 2205214 - 2206263 | 38172.6 |
| abc transporter permease | CKY39_RS10020 | Not Available | Negative | 2206260 - 2207072 | 29436.3 |
| tetr family transcriptional regulator | CKY39_RS10025 | Not Available | Negative | 2207156 - 2207836 | 25116.0 |
| abc transporter substrate-binding protein | CKY39_RS10030 | Not Available | Positive | 2207956 - 2208951 | 35291.1 |
| monovalent cation/h(+) antiporter subunit g | CKY39_RS10035 | Not Available | Negative | 2208976 - 2209326 | 12515.7 |
| k+/h+ antiporter subunit f | CKY39_RS10040 | Not Available | Negative | 2209323 - 2209601 | 9999.83 |
| na+/h+ antiporter subunit e | CKY39_RS10045 | Not Available | Negative | 2209598 - 2210089 | 18247.9 |
| monovalent cation/h+ antiporter subunit d | CKY39_RS10050 | Not Available | Negative | 2210086 - 2211789 | 59231.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
