Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | CKY39_RS09955 | Not Available | Positive | 2193107 - 2193484 | 13285.5 |
| helix-turn-helix domain-containing protein | CKY39_RS09960 | Not Available | Negative | 2193498 - 2194637 | 40923.9 |
| (2fe-2s)-binding protein | CKY39_RS09965 | Not Available | Positive | 2194825 - 2195331 | 17585.2 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | CKY39_RS09970 | Not Available | Positive | 2195342 - 2197726 | 85480.7 |
| fad binding domain-containing protein | CKY39_RS09975 | Not Available | Positive | 2197761 - 2198552 | 27285.8 |
| aaa family atpase | CKY39_RS09980 | Not Available | Positive | 2198617 - 2199519 | 33399.1 |
| vwa domain-containing protein | CKY39_RS09985 | Not Available | Positive | 2199539 - 2200753 | 44419.0 |
| coxg family protein | CKY39_RS09990 | Not Available | Positive | 2200788 - 2201441 | 22262.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS09995 | Not Available | Positive | 2201458 - 2202479 | 35910.5 |
| abc transporter atp-binding protein | CKY39_RS10000 | Not Available | Negative | 2202505 - 2203296 | 28988.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
