Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CKY39_RS09905 | Not Available | Positive | 2182989 - 2183447 | 16440.6 |
| fadr/gntr family transcriptional regulator | CKY39_RS09910 | Not Available | Negative | 2183460 - 2184224 | 29256.2 |
| abc transporter substrate-binding protein | CKY39_RS09915 | Not Available | Positive | 2184439 - 2185644 | 43114.1 |
| branched-chain amino acid abc transporter permease | CKY39_RS09920 | Not Available | Positive | 2185732 - 2186592 | 30399.5 |
| branched-chain amino acid abc transporter permease | CKY39_RS09925 | Not Available | Positive | 2186600 - 2187559 | 34107.7 |
| abc transporter atp-binding protein | CKY39_RS09930 | Not Available | Positive | 2187615 - 2188382 | 27496.5 |
| abc transporter atp-binding protein | CKY39_RS09935 | Not Available | Positive | 2188379 - 2189086 | 25485.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS09940 | Not Available | Positive | 2189113 - 2190392 | 45495.9 |
| abc transporter substrate-binding protein | CKY39_RS09945 | Not Available | Positive | 2190389 - 2191525 | 40049.6 |
| m81 family metallopeptidase | CKY39_RS09950 | Not Available | Positive | 2191522 - 2193015 | 52273.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
