Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 2-aminoethylphosphonate abc transporter atp-binding protein | CKY39_RS09855 | Not Available | Negative | 2171133 - 2172275 | 41636.3 |
| putative 2-aminoethylphosphonate abc transporter substrate-binding protein | CKY39_RS09860 | Not Available | Negative | 2172353 - 2173327 | 35769.7 |
| phosphonate utilization associated transcriptional regulator | CKY39_RS09865 | Not Available | Positive | 2173551 - 2174297 | 27480.7 |
| phosphonoacetate hydrolase | CKY39_RS09870 | Not Available | Positive | 2174299 - 2175525 | 44042.0 |
| phosphonoacetaldehyde dehydrogenase | CKY39_RS09875 | Not Available | Positive | 2175547 - 2176995 | 53001.8 |
| phosphonate degradation hd-domain oxygenase | CKY39_RS09880 | Not Available | Positive | 2176998 - 2177570 | 20774.6 |
| fad-dependent oxidoreductase | CKY39_RS09885 | Not Available | Positive | 2177580 - 2178968 | 50168.1 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | CKY39_RS09890 | Not Available | Negative | 2178987 - 2180504 | 53815.7 |
| aspartate aminotransferase family protein | CKY39_RS09895 | Not Available | Negative | 2180527 - 2181882 | 48272.7 |
| lysr family transcriptional regulator | CKY39_RS09900 | Not Available | Positive | 2181988 - 2182968 | 35622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
