Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyprenyl synthetase family protein | CKY39_RS09805 | Not Available | Positive | 2158517 - 2159431 | 31221.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CKY39_RS09810 | Not Available | Positive | 2159454 - 2161298 | 65945.4 |
| trap transporter substrate-binding protein | CKY39_RS09815 | Not Available | Positive | 2161429 - 2162508 | 39664.3 |
| hypothetical protein | CKY39_RS09820 | Not Available | Negative | 2162583 - 2163104 | 19155.2 |
| trap transporter large permease | CKY39_RS09825 | Not Available | Negative | 2163101 - 2164639 | 55155.4 |
| trap transporter small permease subunit | CKY39_RS09830 | Not Available | Negative | 2164704 - 2165243 | 20167.0 |
| sumf1/egtb/pvdo family nonheme iron enzyme | CKY39_RS09835 | Not Available | Positive | 2165411 - 2166703 | 47816.1 |
| mfs transporter | CKY39_RS09840 | Not Available | Negative | 2166710 - 2168152 | 51472.7 |
| 2-aminoethylphosphonate--pyruvate transaminase | CKY39_RS09845 | Not Available | Negative | 2168230 - 2169360 | 40500.9 |
| putative 2-aminoethylphosphonate abc transporter permease subunit | CKY39_RS09850 | Not Available | Negative | 2169412 - 2171136 | 62452.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
