Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | CKY39_RS09755 | Not Available | Positive | 2147996 - 2149267 | 44195.4 |
| duf3300 domain-containing protein | CKY39_RS09760 | Not Available | Negative | 2149308 - 2151485 | 82599.1 |
| duf3299 domain-containing protein | CKY39_RS09765 | Not Available | Negative | 2151642 - 2152268 | 21957.4 |
| abc transporter permease | CKY39_RS09770 | Not Available | Negative | 2152271 - 2153533 | 44970.3 |
| abc transporter atp-binding protein | CKY39_RS09775 | Not Available | Negative | 2153530 - 2154276 | 27085.6 |
| duf2796 domain-containing protein | CKY39_RS09780 | Not Available | Negative | 2154281 - 2154871 | 20650.7 |
| sulfurtransferase | CKY39_RS09785 | Not Available | Negative | 2154868 - 2155776 | 32293.1 |
| dmt family transporter | CKY39_RS09790 | Not Available | Negative | 2155830 - 2156762 | 32607.3 |
| aromatic ring-hydroxylating oxygenase subunit alpha | CKY39_RS09795 | Not Available | Negative | 2156820 - 2157965 | 43458.3 |
| exodeoxyribonuclease vii small subunit | CKY39_RS09800 | Not Available | Positive | 2158239 - 2158505 | 9307.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
