Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CKY39_RS09655 | Not Available | Negative | 2128833 - 2129834 | 36816.5 |
| abc transporter atp-binding protein | CKY39_RS09660 | Not Available | Negative | 2129831 - 2130865 | 37558.8 |
| abc transporter permease | CKY39_RS09665 | Not Available | Negative | 2130879 - 2131796 | 32395.4 |
| abc transporter permease | CKY39_RS09670 | Not Available | Negative | 2131822 - 2132757 | 33621.2 |
| abc transporter substrate-binding protein | CKY39_RS09675 | Not Available | Negative | 2132771 - 2134348 | 56920.3 |
| m81 family metallopeptidase | CKY39_RS09680 | Not Available | Negative | 2134396 - 2135847 | 51494.1 |
| nad(p)/fad-dependent oxidoreductase | CKY39_RS09685 | Not Available | Negative | 2135891 - 2137045 | 41081.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS09690 | Not Available | Positive | 2137249 - 2137961 | 26031.3 |
| duf2200 domain-containing protein | CKY39_RS09695 | Not Available | Positive | 2138005 - 2138355 | 13471.5 |
| class i sam-dependent methyltransferase | CKY39_RS09700 | Not Available | Negative | 2138363 - 2139178 | 29398.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
