Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | CKY39_RS09605 | Not Available | Positive | 2117566 - 2118465 | 31276.2 |
| zip family metal transporter | CKY39_RS09610 | Not Available | Positive | 2118578 - 2119483 | 32000.7 |
| hypothetical protein | CKY39_RS09615 | Not Available | Positive | 2119615 - 2119833 | 7651.94 |
| amidase | CKY39_RS09620 | Not Available | Negative | 2119845 - 2121230 | 49114.7 |
| dipeptide abc transporter atp-binding protein | CKY39_RS09625 | Not Available | Negative | 2121294 - 2122925 | 58496.3 |
| abc transporter permease | CKY39_RS09630 | Not Available | Negative | 2122928 - 2123878 | 33349.5 |
| abc transporter permease | CKY39_RS09635 | Not Available | Negative | 2123900 - 2124841 | 33807.4 |
| abc transporter substrate-binding protein | CKY39_RS09640 | Not Available | Negative | 2124983 - 2126581 | 58112.1 |
| marr family winged helix-turn-helix transcriptional regulator | CKY39_RS09645 | Not Available | Negative | 2126588 - 2127127 | 20078.5 |
| n-acyl-d-amino-acid deacylase family protein | CKY39_RS09650 | Not Available | Negative | 2127362 - 2128819 | 52213.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
