Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS09505 | Not Available | Negative | 2095498 - 2095782 | 10214.2 |
| Trna-lys | Not Available | Not Available | Positive | 2095907 - 2095982 | Not Available |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS09515 | Not Available | Positive | 2096133 - 2096840 | 24277.1 |
| Trna-ala | Not Available | Not Available | Positive | 2096916 - 2096991 | Not Available |
| alpha/beta hydrolase | CKY39_RS09525 | Not Available | Positive | 2097080 - 2097946 | 31416.6 |
| gmp reductase | CKY39_RS09530 | Not Available | Negative | 2097984 - 2098961 | 35537.9 |
| ompw/alkl family protein | CKY39_RS09535 | Not Available | Negative | 2099182 - 2099835 | 23298.6 |
| uvrd-helicase domain-containing protein | CKY39_RS09540 | Not Available | Positive | 2100035 - 2102488 | 89830.3 |
| bpss1780 family membrane protein | CKY39_RS09545 | Not Available | Negative | 2102535 - 2103365 | 29691.3 |
| homoserine kinase | CKY39_RS09550 | Not Available | Negative | 2103385 - 2104434 | 38150.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
