Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS09455 | Not Available | Negative | 2086650 - 2087600 | 34756.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS09460 | Not Available | Negative | 2087782 - 2088750 | 33935.2 |
| pdr/vanb family oxidoreductase | CKY39_RS09465 | Not Available | Negative | 2088801 - 2089751 | 33793.6 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | CKY39_RS09470 | Not Available | Negative | 2089755 - 2090831 | 40342.9 |
| lysr family transcriptional regulator | CKY39_RS09475 | Not Available | Positive | 2090940 - 2091908 | 36161.2 |
| duf4124 domain-containing protein | CKY39_RS09480 | Not Available | Positive | 2092015 - 2092485 | 16672.7 |
| ribonuclease hi family protein | CKY39_RS09485 | Not Available | Positive | 2092523 - 2092987 | 16721.0 |
| duf3297 family protein | CKY39_RS09490 | Not Available | Positive | 2093053 - 2093307 | 9573.44 |
| duf2272 domain-containing protein | CKY39_RS09495 | Not Available | Negative | 2093348 - 2094400 | 36856.9 |
| alpha/beta hydrolase | CKY39_RS09500 | Not Available | Positive | 2094491 - 2095492 | 35437.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
