Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CKY39_RS09405 | Not Available | Negative | 2079722 - 2080009 | 9676.57 |
| hypothetical protein | CKY39_RS09410 | Not Available | Positive | 2080107 - 2080613 | 18722.6 |
| hypothetical protein | CKY39_RS33215 | Not Available | Positive | 2080875 - 2081432 | 19967.8 |
| tetratricopeptide repeat protein | CKY39_RS09415 | Not Available | Positive | 2081429 - 2081803 | 13240.7 |
| dihydrofolate reductase family protein | CKY39_RS09420 | Not Available | Positive | 2081835 - 2082413 | 20705.9 |
| hd domain-containing protein | CKY39_RS09425 | Not Available | Positive | 2082483 - 2083019 | 19488.0 |
| abc transporter substrate-binding protein | CKY39_RS09430 | Not Available | Positive | 2083077 - 2084237 | 41309.6 |
| dmt family transporter | CKY39_RS09435 | Not Available | Positive | 2084349 - 2085242 | 31775.8 |
| hypothetical protein | CKY39_RS09440 | Not Available | Positive | 2085287 - 2085706 | 15558.4 |
| gfa family protein | CKY39_RS09450 | Not Available | Negative | 2086086 - 2086469 | 13834.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
