Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CKY39_RS09210 | Not Available | Negative | 2040749 - 2042008 | 43703.5 |
| glxa family transcriptional regulator | CKY39_RS09215 | Not Available | Positive | 2042184 - 2043131 | 34068.1 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS09220 | Not Available | Positive | 2043236 - 2044063 | 28533.3 |
| hypothetical protein | CKY39_RS09225 | Not Available | Negative | 2044153 - 2045091 | 34195.7 |
| bmp family abc transporter substrate-binding protein | CKY39_RS09230 | Not Available | Positive | 2045090 - 2046205 | 40136.3 |
| guanine deaminase | CKY39_RS09235 | Not Available | Positive | 2046308 - 2047594 | 46795.1 |
| dctp deaminase | CKY39_RS09240 | Not Available | Positive | 2047680 - 2048246 | 21296.2 |
| neutral zinc metallopeptidase | CKY39_RS09245 | Not Available | Positive | 2048359 - 2049246 | 31412.8 |
| dead/deah box helicase | CKY39_RS09250 | Not Available | Positive | 2049377 - 2050846 | 53766.3 |
| rhodanese-related sulfurtransferase | CKY39_RS09255 | Not Available | Negative | 2050919 - 2052556 | 58721.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
