Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bmp family abc transporter substrate-binding protein | CKY39_RS09160 | Not Available | Positive | 2029692 - 2030861 | 41315.0 |
| hypothetical protein | CKY39_RS09165 | Not Available | Positive | 2030946 - 2031323 | 13565.5 |
| nuclear transport factor 2 family protein | CKY39_RS09170 | Not Available | Negative | 2031330 - 2031722 | 14568.8 |
| beta-ketoacyl-acp synthase i | CKY39_RS09175 | Not Available | Negative | 2031827 - 2033047 | 42877.3 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba | CKY39_RS09180 | Not Available | Negative | 2033058 - 2033573 | 18540.4 |
| adenosine deaminase | CKY39_RS09185 | Not Available | Positive | 2033807 - 2034874 | 39296.9 |
| mfs transporter | CKY39_RS09190 | Not Available | Negative | 2034835 - 2036097 | 42997.5 |
| lysr substrate-binding domain-containing protein | CKY39_RS09195 | Not Available | Positive | 2036254 - 2037207 | 34542.0 |
| helix-turn-helix domain-containing protein | CKY39_RS09200 | Not Available | Positive | 2037296 - 2038105 | 29783.7 |
| penicillin acylase family protein | CKY39_RS09205 | Not Available | Positive | 2038222 - 2040759 | 89537.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
