Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase subunit alpha | CKY39_RS09110 | Not Available | Negative | 2014865 - 2017024 | 77688.7 |
| lysr family transcriptional regulator | CKY39_RS09115 | Not Available | Positive | 2017112 - 2018026 | 33965.5 |
| sulfite exporter taue/safe family protein | CKY39_RS09120 | Not Available | Positive | 2018300 - 2019079 | 27457.6 |
| xanthine dehydrogenase small subunit | CKY39_RS09125 | Not Available | Positive | 2019267 - 2020886 | 58058.8 |
| xanthine dehydrogenase molybdopterin binding subunit | CKY39_RS09130 | Not Available | Positive | 2020889 - 2023348 | 88162.3 |
| lysr family transcriptional regulator | CKY39_RS09135 | Not Available | Positive | 2023443 - 2024435 | 36452.3 |
| ncs2 family permease | CKY39_RS09140 | Not Available | Positive | 2024512 - 2025909 | 48608.8 |
| abc transporter atp-binding protein | CKY39_RS09145 | Not Available | Positive | 2026009 - 2027556 | 55344.1 |
| abc transporter permease | CKY39_RS09150 | Not Available | Positive | 2027543 - 2028715 | 40910.2 |
| abc transporter permease | CKY39_RS09155 | Not Available | Positive | 2028719 - 2029639 | 32133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
