Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative endolysin | CKY39_RS31265 | Not Available | Positive | 6763723 - 6764349 | 22672.2 |
| Hypothetical protein | CKY39_RS31270 | Not Available | Positive | 6764346 - 6764879 | 18549.4 |
| Tail completion protein-like protein | CKY39_RS31275 | Not Available | Positive | 6764883 - 6765368 | 18239.6 |
| Virion morphogenesis protein | CKY39_RS31280 | Not Available | Positive | 6765371 - 6765835 | 17233.1 |
| Baseplate assembly protein | CKY39_RS31285 | Not Available | Positive | 6765936 - 6766727 | 27315.1 |
| Baseplate wedge subunit | CKY39_RS31290 | Not Available | Positive | 6766724 - 6767056 | 12117.7 |
| Putative phage tail protein | CKY39_RS31295 | Not Available | Positive | 6767065 - 6767964 | 32103.1 |
| Putative phage tail protein | CKY39_RS31300 | Not Available | Positive | 6767961 - 6768647 | 24901.5 |
| hypothetical protein | CKY39_RS33570 | Not Available | Positive | 6768644 - 6769357 | 24912.5 |
| hypothetical protein | CKY39_RS33575 | Not Available | Positive | 6769792 - 6770013 | 7804.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
