Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | CKY39_RS09060 | Not Available | Positive | 2004277 - 2005719 | 50562.0 |
| mgtc/sapb family protein | CKY39_RS09065 | Not Available | Negative | 2005716 - 2006432 | 25070.1 |
| magnesium-translocating p-type atpase | CKY39_RS09070 | Not Available | Negative | 2006524 - 2009289 | 100935.0 |
| hypothetical protein | CKY39_RS09075 | Not Available | Negative | 2009314 - 2010057 | 27017.1 |
| hypothetical protein | CKY39_RS09080 | Not Available | Negative | 2010272 - 2010487 | 8035.63 |
| hypothetical protein | CKY39_RS09085 | Not Available | Negative | 2010777 - 2011055 | 10203.2 |
| low molecular weight protein-tyrosine-phosphatase | CKY39_RS09090 | Not Available | Positive | 2011256 - 2011732 | 17216.6 |
| acyl-coa thioesterase | CKY39_RS09095 | Not Available | Negative | 2011751 - 2012197 | 16469.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS09100 | Not Available | Negative | 2012218 - 2013210 | 34271.2 |
| indolepyruvate oxidoreductase subunit beta family protein | CKY39_RS09105 | Not Available | Negative | 2013225 - 2014847 | 57803.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
