Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CKY39_RS08960 | Not Available | Negative | 1982161 - 1983654 | 53755.6 |
| atp-binding cassette domain-containing protein | CKY39_RS08965 | Not Available | Negative | 1983706 - 1984533 | 29925.0 |
| abc transporter atp-binding protein | CKY39_RS08970 | Not Available | Negative | 1984530 - 1985522 | 34836.7 |
| abc transporter permease | CKY39_RS08975 | Not Available | Negative | 1985529 - 1986413 | 31034.8 |
| abc transporter permease | CKY39_RS08980 | Not Available | Negative | 1986410 - 1987360 | 34023.0 |
| tartrate dehydrogenase | CKY39_RS08985 | Not Available | Negative | 1987543 - 1988634 | 39697.4 |
| aldo/keto reductase | CKY39_RS08990 | Not Available | Positive | 1988908 - 1989765 | 30582.8 |
| nucleobase:cation symporter-2 family protein | CKY39_RS08995 | Not Available | Negative | 1989783 - 1991273 | 51619.2 |
| gntr family transcriptional regulator | CKY39_RS09000 | Not Available | Negative | 1991495 - 1992256 | 27954.7 |
| aspartate/glutamate racemase family protein | CKY39_RS09005 | Not Available | Negative | 1992271 - 1993008 | 26061.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
