Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate-binding protein | CKY39_RS08910 | Not Available | Negative | 1973279 - 1974724 | 52320.3 |
| hypothetical protein | CKY39_RS08915 | Not Available | Negative | 1974700 - 1975407 | 25970.1 |
| hypothetical protein | CKY39_RS08920 | Not Available | Negative | 1975558 - 1976004 | 15515.9 |
| winged helix-turn-helix transcriptional regulator | CKY39_RS08925 | Not Available | Negative | 1976145 - 1976411 | 10121.2 |
| carboxymuconolactone decarboxylase family protein | CKY39_RS08930 | Not Available | Positive | 1976527 - 1977069 | 20095.2 |
| ethd family reductase | CKY39_RS08935 | Not Available | Positive | 1977107 - 1977433 | 12149.7 |
| orotidine-5'-phosphate decarboxylase | CKY39_RS08940 | Not Available | Positive | 1977475 - 1978185 | 23944.0 |
| nad(p)-dependent oxidoreductase | CKY39_RS08945 | Not Available | Negative | 1978368 - 1979264 | 30761.4 |
| aldehyde dehydrogenase family protein | CKY39_RS08950 | Not Available | Negative | 1979269 - 1980717 | 50994.7 |
| amidase | CKY39_RS08955 | Not Available | Negative | 1980753 - 1982153 | 50087.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
