Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS33205 | Not Available | Negative | 1958062 - 1958664 | 20969.5 |
| serine hydrolase domain-containing protein | CKY39_RS08870 | Not Available | Negative | 1959911 - 1960852 | 33938.4 |
| hypothetical protein | CKY39_RS33210 | Not Available | Positive | 1960970 - 1961347 | 13390.0 |
| atp-binding protein | CKY39_RS08875 | Not Available | Positive | 1961464 - 1961697 | 8566.4 |
| cupin domain-containing protein | CKY39_RS08880 | Not Available | Negative | 1961827 - 1962207 | 13988.5 |
| phospholipase d-like domain-containing protein | CKY39_RS08885 | Not Available | Negative | 1962376 - 1964088 | 61496.8 |
| response regulator | CKY39_RS08890 | Not Available | Positive | 1964297 - 1964980 | 25344.9 |
| hybrid sensor histidine kinase/response regulator | CKY39_RS08895 | Not Available | Positive | 1964983 - 1966743 | 61799.0 |
| alkaline phosphatase d family protein | CKY39_RS08900 | Not Available | Positive | 1966773 - 1972388 | 200735.0 |
| hypothetical protein | CKY39_RS08905 | Not Available | Positive | 1972856 - 1973251 | 14443.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
