Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulp family inorganic anion transporter | CKY39_RS08810 | Not Available | Positive | 1942857 - 1944647 | 62550.1 |
| hypothetical protein | CKY39_RS08815 | Not Available | Positive | 1944745 - 1945719 | 35829.7 |
| duf308 domain-containing protein | CKY39_RS08820 | Not Available | Negative | 1945688 - 1946302 | 21793.1 |
| hd domain-containing phosphohydrolase | CKY39_RS08825 | Not Available | Positive | 1946453 - 1947922 | 52172.4 |
| indolepyruvate ferredoxin oxidoreductase family protein | CKY39_RS08830 | Not Available | Negative | 1947939 - 1951484 | 128185.0 |
| lysr family transcriptional regulator | CKY39_RS08835 | Not Available | Positive | 1951749 - 1952636 | 33074.1 |
| hypothetical protein | CKY39_RS08840 | Not Available | Positive | 1953097 - 1953375 | 10127.0 |
| glycosyltransferase | CKY39_RS08845 | Not Available | Positive | 1953487 - 1955259 | 64684.9 |
| hypothetical protein | CKY39_RS08855 | Not Available | Positive | 1956491 - 1956712 | 8368.09 |
| hypothetical protein | CKY39_RS08865 | Not Available | Negative | 1957443 - 1957937 | 18175.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
