Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CKY39_RS08760 | Not Available | Negative | 1931098 - 1932126 | 36975.2 |
| aromatic ring-hydroxylating oxygenase subunit alpha | CKY39_RS08765 | Not Available | Positive | 1932477 - 1933550 | 40771.4 |
| carotenoid oxygenase family protein | CKY39_RS08770 | Not Available | Negative | 1933602 - 1935101 | 54408.1 |
| duf2141 domain-containing protein | CKY39_RS08775 | Not Available | Negative | 1935114 - 1935551 | 15139.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS08780 | Not Available | Negative | 1935697 - 1936805 | 39697.1 |
| gntr family transcriptional regulator | CKY39_RS08785 | Not Available | Negative | 1936967 - 1937674 | 25456.4 |
| c4-dicarboxylate transporter dcta | CKY39_RS08790 | Not Available | Negative | 1937680 - 1939011 | 46156.1 |
| dihydrolipoamide acetyltransferase family protein | CKY39_RS08795 | Not Available | Negative | 1939184 - 1940389 | 42554.4 |
| alpha-ketoacid dehydrogenase subunit beta | CKY39_RS08800 | Not Available | Negative | 1940390 - 1941403 | 36783.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS08805 | Not Available | Negative | 1941409 - 1942649 | 43758.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
