Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus modification protein pilv | CKY39_RS08710 | Not Available | Negative | 1923078 - 1923632 | 19419.5 |
| type iv pilin protein | CKY39_RS08715 | Not Available | Negative | 1923626 - 1924030 | 14479.2 |
| carbon starvation csta family protein | CKY39_RS08720 | Not Available | Positive | 1924261 - 1926333 | 73515.3 |
| ybdd/yjix family protein | CKY39_RS08725 | Not Available | Positive | 1926351 - 1926557 | 7756.45 |
| lysr substrate-binding domain-containing protein | CKY39_RS08730 | Not Available | Negative | 1926612 - 1927496 | 31577.5 |
| yeih family protein | CKY39_RS08735 | Not Available | Positive | 1927567 - 1928619 | 35771.8 |
| sel1 repeat family protein | CKY39_RS08740 | Not Available | Positive | 1928734 - 1929153 | 15162.3 |
| hypothetical protein | CKY39_RS08745 | Not Available | Positive | 1929236 - 1929700 | 17160.3 |
| urease accessory protein ured | CKY39_RS08750 | Not Available | Negative | 1929721 - 1930551 | 30289.4 |
| nucleoside deaminase | CKY39_RS08755 | Not Available | Negative | 1930574 - 1931101 | 18815.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
