Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | CKY39_RS08660 | Not Available | Positive | 1910887 - 1911894 | 37508.0 |
| duf938 domain-containing protein | CKY39_RS08665 | Not Available | Positive | 1912591 - 1913238 | 23434.9 |
| c40 family peptidase | CKY39_RS08670 | Not Available | Positive | 1913344 - 1913901 | 19409.3 |
| fad-dependent oxidoreductase | CKY39_RS08675 | Not Available | Negative | 1913924 - 1915228 | 47095.1 |
| duf5666 domain-containing protein | CKY39_RS08680 | Not Available | Negative | 1915335 - 1916405 | 35831.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS08685 | Not Available | Negative | 1916736 - 1917545 | 29964.1 |
| gsph/fimt family pseudopilin | CKY39_RS08690 | Not Available | Negative | 1917665 - 1918201 | 18651.3 |
| pilus assembly protein | CKY39_RS08695 | Not Available | Negative | 1918206 - 1921310 | 109672.0 |
| pilx n-terminal domain-containing pilus assembly protein | CKY39_RS08700 | Not Available | Negative | 1921337 - 1921954 | 20351.2 |
| pilw family protein | CKY39_RS08705 | Not Available | Negative | 1921951 - 1923081 | 40947.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
