Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Acyltransferase 3 | CKY39_RS31215 | Not Available | Positive | 6754501 - 6755595 | 39603.9 |
| hypothetical protein | CKY39_RS31220 | Not Available | Negative | 6755945 - 6756142 | 7551.01 |
| Portal protein | CKY39_RS31225 | Not Available | Negative | 6756259 - 6757287 | 37837.0 |
| Gp35 | CKY39_RS31230 | Not Available | Negative | 6757317 - 6759347 | 76236.7 |
| Gpo family capsid scaffolding protein | CKY39_RS31235 | Not Available | Positive | 6759389 - 6760231 | 29904.2 |
| Capsid protein | CKY39_RS31240 | Not Available | Positive | 6760291 - 6761310 | 37199.2 |
| Terminase small subunit | CKY39_RS31245 | Not Available | Positive | 6761405 - 6762337 | 33352.7 |
| Phage head completion/stabilization protein | CKY39_RS31250 | Not Available | Positive | 6762449 - 6762946 | 18272.6 |
| Tail protein | CKY39_RS31255 | Not Available | Positive | 6762949 - 6763161 | 7610.29 |
| hypothetical protein | CKY39_RS31260 | Not Available | Positive | 6763173 - 6763715 | 18929.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
