Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide pyrophosphohydrolase | CKY39_RS08565 | Not Available | Positive | 1890522 - 1890845 | 11937.2 |
| urea abc transporter substrate-binding protein | CKY39_RS08570 | Not Available | Positive | 1890963 - 1892231 | 45964.3 |
| urea abc transporter permease subunit urtb | CKY39_RS08575 | Not Available | Positive | 1892393 - 1893940 | 54333.7 |
| urea abc transporter permease subunit urtc | CKY39_RS08580 | Not Available | Positive | 1893937 - 1895160 | 44445.3 |
| urea abc transporter atp-binding protein urtd | CKY39_RS08585 | Not Available | Positive | 1895157 - 1896035 | 31734.3 |
| urea abc transporter atp-binding subunit urte | CKY39_RS08590 | Not Available | Positive | 1896298 - 1896990 | 25209.1 |
| mfs transporter | CKY39_RS08595 | Not Available | Positive | 1897100 - 1898356 | 42158.5 |
| hypothetical protein | CKY39_RS08600 | Not Available | Positive | 1898430 - 1899035 | 21812.5 |
| alkaline phosphatase d family protein | CKY39_RS08605 | Not Available | Positive | 1899032 - 1900582 | 56635.8 |
| aldo/keto reductase | CKY39_RS08610 | Not Available | Positive | 1900672 - 1901682 | 36787.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
