Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS08515 | Not Available | Negative | 1880069 - 1880925 | 29791.6 |
| gmc family oxidoreductase | CKY39_RS08520 | Not Available | Negative | 1881046 - 1882620 | 56853.0 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS08525 | Not Available | Negative | 1882630 - 1883616 | 34049.4 |
| lysr family transcriptional regulator | CKY39_RS08530 | Not Available | Positive | 1883723 - 1884664 | 34895.7 |
| transporter | CKY39_RS08535 | Not Available | Negative | 1884678 - 1885712 | 38023.8 |
| polyphosphate kinase 2 | CKY39_RS08540 | Not Available | Positive | 1885907 - 1886833 | 36148.3 |
| alpha/beta hydrolase family esterase | CKY39_RS08545 | Not Available | Positive | 1886883 - 1887917 | 36646.5 |
| mfs transporter | CKY39_RS08550 | Not Available | Positive | 1887990 - 1889483 | 50319.6 |
| hypothetical protein | CKY39_RS08555 | Not Available | Negative | 1889432 - 1889860 | 15457.7 |
| nucleotidyltransferase domain-containing protein | CKY39_RS08560 | Not Available | Negative | 1889844 - 1890539 | 24734.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
