Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | CKY39_RS08465 | Not Available | Positive | 1869913 - 1871280 | 48112.0 |
| lysr family transcriptional regulator | CKY39_RS08470 | Not Available | Negative | 1871256 - 1872197 | 34650.1 |
| mfs transporter | CKY39_RS08475 | Not Available | Positive | 1872342 - 1873544 | 41149.7 |
| phage holin family protein | CKY39_RS08480 | Not Available | Negative | 1873609 - 1874010 | 14268.2 |
| surface-behavior sensor histidine kinase shks | CKY39_RS08485 | Not Available | Positive | 1874233 - 1875624 | 51247.4 |
| luxr c-terminal-related transcriptional regulator | CKY39_RS08490 | Not Available | Negative | 1875700 - 1876302 | 21863.4 |
| tryptophan--trna ligase | CKY39_RS08495 | Not Available | Negative | 1876379 - 1877710 | 48298.5 |
| site-2 protease family protein | CKY39_RS08500 | Not Available | Negative | 1877728 - 1878399 | 24485.9 |
| l-threonylcarbamoyladenylate synthase | CKY39_RS08505 | Not Available | Negative | 1878443 - 1879078 | 23246.0 |
| dmt family transporter | CKY39_RS08510 | Not Available | Negative | 1879095 - 1880072 | 35138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
