Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase/pep mutase family protein | CKY39_RS08415 | Not Available | Negative | 1854841 - 1855704 | 31015.4 |
| 2-methylaconitate cis-trans isomerase prpf | CKY39_RS08420 | Not Available | Negative | 1855734 - 1856924 | 41091.4 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | CKY39_RS08425 | Not Available | Negative | 1856927 - 1859521 | 94311.6 |
| 2-methylcitrate synthase | CKY39_RS08430 | Not Available | Negative | 1859583 - 1860740 | 42397.8 |
| acyl-coa thioesterase | CKY39_RS08435 | Not Available | Negative | 1860737 - 1861147 | 14494.5 |
| short-chain fatty acyl-coa regulator family protein | CKY39_RS08440 | Not Available | Positive | 1861268 - 1862695 | 52021.5 |
| efflux transporter outer membrane subunit | CKY39_RS08445 | Not Available | Negative | 1862708 - 1864165 | 51126.3 |
| efflux rnd transporter permease subunit | CKY39_RS08450 | Not Available | Negative | 1864165 - 1867329 | 112496.0 |
| efflux rnd transporter periplasmic adaptor subunit | CKY39_RS08455 | Not Available | Negative | 1867339 - 1868502 | 40381.4 |
| lysr substrate-binding domain-containing protein | CKY39_RS08460 | Not Available | Negative | 1868780 - 1869730 | 34729.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
