Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | CKY39_RS08215 | Not Available | Positive | 1816975 - 1817727 | 27290.2 |
| lytr/algr family response regulator transcription factor | CKY39_RS08220 | Not Available | Positive | 1817724 - 1818518 | 29220.4 |
| hypothetical protein | CKY39_RS08225 | Not Available | Negative | 1818552 - 1819430 | 32564.1 |
| flagellar biosynthetic protein flir | CKY39_RS08230 | Not Available | Negative | 1819541 - 1820338 | 28241.9 |
| flagellar biosynthesis protein fliq | CKY39_RS08235 | Not Available | Negative | 1820335 - 1820604 | 9660.44 |
| flagellar type iii secretion system pore protein flip | CKY39_RS08240 | Not Available | Negative | 1820601 - 1821359 | 27379.5 |
| flagellar biosynthetic protein flio | CKY39_RS08245 | Not Available | Negative | 1821356 - 1821826 | 15964.9 |
| flagellar motor switch protein flin | CKY39_RS08250 | Not Available | Negative | 1821823 - 1822251 | 14850.6 |
| flagellar motor switch protein flim | CKY39_RS08255 | Not Available | Negative | 1822244 - 1823245 | 37115.8 |
| flagellar basal body-associated protein flil | CKY39_RS08260 | Not Available | Negative | 1823276 - 1823791 | 18082.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
