Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Vpf491 | CKY39_RS27295 | Not Available | Negative | 5907692 - 5909206 | 53374.8 |
| Putative major coat protein | CKY39_RS27300 | Not Available | Negative | 5909314 - 5909550 | 7964.79 |
| hypothetical protein | CKY39_RS27305 | Not Available | Negative | 5909651 - 5909863 | 7494.49 |
| hypothetical protein | CKY39_RS33845 | Not Available | Negative | 5910186 - 5910338 | 5850.26 |
| hypothetical protein | CKY39_RS27310 | Not Available | Negative | 5910359 - 5910679 | 11709.0 |
| hypothetical protein | CKY39_RS27320 | Not Available | Positive | 5911580 - 5911843 | 9509.66 |
| Dna repair protein recn | CKY39_RS27325 | Not Available | Positive | 5911854 - 5912759 | 32611.1 |
| Dna repair protein recn | CKY39_RS27330 | Not Available | Positive | 5912797 - 5914479 | 59764.6 |
| Hnh endonuclease | CKY39_RS27335 | Not Available | Positive | 5914482 - 5915354 | 32598.1 |
| Hypothetical protein | CKY39_RS27340 | Not Available | Negative | 5915368 - 5916402 | 37989.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
