Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yada-like family protein | CKY39_RS08070 | Not Available | Negative | 1789240 - 1789620 | 13092.5 |
| flagella synthesis protein flgn | CKY39_RS08075 | Not Available | Negative | 1789683 - 1790138 | 15887.7 |
| flagellar biosynthesis anti-sigma factor flgm | CKY39_RS08080 | Not Available | Negative | 1790135 - 1790431 | 10127.1 |
| flagellar basal body p-ring formation chaperone flga | CKY39_RS08085 | Not Available | Negative | 1790528 - 1791226 | 23890.0 |
| flagellar basal body rod protein flgb | CKY39_RS08090 | Not Available | Positive | 1791447 - 1791860 | 15028.7 |
| flagellar basal body rod protein flgc | CKY39_RS08095 | Not Available | Positive | 1791857 - 1792252 | 13840.5 |
| flagellar hook assembly protein flgd | CKY39_RS08100 | Not Available | Positive | 1792297 - 1792983 | 23390.6 |
| flagellar hook protein flge | CKY39_RS08105 | Not Available | Positive | 1793066 - 1794280 | 41347.0 |
| flagellar basal body rod protein flgf | CKY39_RS08110 | Not Available | Positive | 1794294 - 1795040 | 25454.4 |
| flagellar basal-body rod protein flgg | CKY39_RS08115 | Not Available | Positive | 1795064 - 1795846 | 27437.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
