Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope integrity protein tola | CKY39_RS08025 | Not Available | Negative | 1775481 - 1776449 | 35960.2 |
| hypothetical protein | CKY39_RS08030 | Not Available | Positive | 1776736 - 1777899 | 44972.5 |
| h-ns family nucleoid-associated regulatory protein | CKY39_RS08035 | Not Available | Negative | 1777982 - 1778350 | 13873.6 |
| yfji family protein | CKY39_RS08040 | Not Available | Negative | 1778428 - 1779852 | 52674.4 |
| hypothetical protein | CKY39_RS33185 | Not Available | Positive | 1780245 - 1780520 | 9866.87 |
| hypothetical protein | CKY39_RS33190 | Not Available | Positive | 1780517 - 1781653 | 44187.3 |
| helix-turn-helix transcriptional regulator | CKY39_RS34175 | Not Available | Negative | 1782096 - 1783112 | 37782.6 |
| tyrosine-type recombinase/integrase | CKY39_RS08055 | Not Available | Negative | 1783232 - 1784452 | 45595.9 |
| transglycosylase domain-containing protein | CKY39_RS08060 | Not Available | Negative | 1784694 - 1787711 | 111165.0 |
| response regulator transcription factor | CKY39_RS08065 | Not Available | Negative | 1788283 - 1789116 | 30813.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
