Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | CKY39_RS07890 | Not Available | Positive | 1737910 - 1738593 | 25828.9 |
| hnh endonuclease family protein | CKY39_RS07895 | Not Available | Positive | 1738590 - 1739630 | 39917.8 |
| hypothetical protein | CKY39_RS07900 | Not Available | Positive | 1739771 - 1740562 | 28530.7 |
| hypothetical protein | CKY39_RS07905 | Not Available | Positive | 1740559 - 1741539 | 35600.0 |
| hypothetical protein | CKY39_RS07910 | Not Available | Negative | 1741681 - 1742532 | 30211.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS07915 | Not Available | Negative | 1742745 - 1742858 | 4220.94 |
| m15 family metallopeptidase | CKY39_RS07920 | Not Available | Positive | 1743003 - 1744085 | 39557.9 |
| hypothetical protein | CKY39_RS33145 | Not Available | Negative | 1744344 - 1745273 | 34683.2 |
| hypothetical protein | CKY39_RS33150 | Not Available | Positive | 1745575 - 1745718 | 5060.33 |
| hypothetical protein | CKY39_RS07930 | Not Available | Negative | 1745944 - 1746366 | 15896.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
