Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | CKY39_RS07795 | Not Available | Positive | 1722537 - 1723361 | 30150.6 |
| metallophosphoesterase | CKY39_RS07800 | Not Available | Positive | 1723539 - 1726613 | 115531.0 |
| is66 family insertion sequence element accessory protein tnpb | CKY39_RS07810 | Not Available | Positive | 1726887 - 1727189 | 10871.3 |
| helix-turn-helix domain-containing protein | CKY39_RS07815 | Not Available | Negative | 1727920 - 1728147 | 8514.34 |
| hypothetical protein | CKY39_RS07820 | Not Available | Positive | 1728708 - 1729163 | 15868.9 |
| hypothetical protein | CKY39_RS07825 | Not Available | Positive | 1729271 - 1729483 | 7523.56 |
| hypothetical protein | CKY39_RS33135 | Not Available | Positive | 1729480 - 1729734 | 9120.41 |
| hypothetical protein | CKY39_RS33140 | Not Available | Positive | 1729751 - 1730086 | 12161.7 |
| j domain-containing protein | CKY39_RS07830 | Not Available | Positive | 1730098 - 1731249 | 42452.3 |
| duf2958 domain-containing protein | CKY39_RS07835 | Not Available | Positive | 1731460 - 1731807 | 12901.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
