Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | CKY39_RS07700 | Not Available | Positive | 1698112 - 1698645 | 19206.2 |
| helix-turn-helix domain-containing protein | CKY39_RS34160 | Not Available | Positive | 1698642 - 1698839 | 7222.02 |
| sensor histidine kinase | CKY39_RS07705 | Not Available | Positive | 1699690 - 1701582 | 70556.7 |
| sensor histidine kinase | CKY39_RS07710 | Not Available | Positive | 1701579 - 1703549 | 73433.1 |
| cj0069 family protein | CKY39_RS34165 | Not Available | Positive | 1704508 - 1706169 | 60255.1 |
| tyrosine-type recombinase/integrase | CKY39_RS07725 | Not Available | Positive | 1706873 - 1708066 | 45878.7 |
| hypothetical protein | CKY39_RS33130 | Not Available | Positive | 1708189 - 1709913 | 64883.0 |
| integrase | CKY39_RS07730 | Not Available | Positive | 1710550 - 1711953 | 52042.6 |
| tetr family transcriptional regulator | CKY39_RS07735 | Not Available | Positive | 1712079 - 1712387 | 10842.0 |
| nad(p)/fad-dependent oxidoreductase | CKY39_RS07740 | Not Available | Positive | 1712536 - 1713759 | 42571.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
