Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Arac family transcriptional regulator | CKY39_RS20705 | Not Available | Negative | 4454482 - 4455297 | 29118.1 |
| acetoacetate decarboxylase family protein | CKY39_RS20710 | Not Available | Negative | 4455344 - 4456141 | 28388.0 |
| response regulator | CKY39_RS20715 | Not Available | Positive | 4456377 - 4456760 | 13934.3 |
| Gp183 | CKY39_RS20720 | Not Available | Negative | 4456765 - 4458054 | 45545.0 |
| Hypothetical protein | CKY39_RS27265 | Not Available | Negative | 5903266 - 5903811 | 19678.2 |
| hypothetical protein | CKY39_RS27270 | Not Available | Positive | 5903912 - 5904316 | 15025.6 |
| Hypothetical protein | CKY39_RS27275 | Not Available | Negative | 5904323 - 5905270 | 36196.6 |
| hypothetical protein | CKY39_RS34810 | Not Available | Negative | 5905371 - 5905493 | 5097.96 |
| Vpf380 | CKY39_RS27285 | Not Available | Negative | 5905976 - 5907358 | 50553.6 |
| Putative minor coat protein | CKY39_RS27290 | Not Available | Negative | 5907355 - 5907690 | 11771.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
