Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slyx family protein | CKY39_RS07555 | Not Available | Positive | 1665644 - 1665868 | 8550.97 |
| paqr family membrane homeostasis protein trha | CKY39_RS07560 | Not Available | Negative | 1665879 - 1666496 | 22147.4 |
| response regulator transcription factor | CKY39_RS07565 | Not Available | Negative | 1666649 - 1667212 | 20613.6 |
| atp-binding protein | CKY39_RS07570 | Not Available | Negative | 1667209 - 1668603 | 50365.4 |
| surf1 family protein | CKY39_RS07575 | Not Available | Negative | 1668587 - 1669411 | 29599.0 |
| cytochrome o ubiquinol oxidase subunit iv | CKY39_RS07580 | Not Available | Negative | 1669411 - 1669833 | 15159.8 |
| cytochrome o ubiquinol oxidase subunit iii | CKY39_RS07585 | Not Available | Negative | 1669830 - 1670471 | 23587.2 |
| cytochrome o ubiquinol oxidase subunit i | CKY39_RS07590 | Not Available | Negative | 1670464 - 1672470 | 74609.9 |
| ubiquinol oxidase subunit ii | CKY39_RS07595 | Not Available | Negative | 1672472 - 1673497 | 37885.1 |
| mfs transporter | CKY39_RS07600 | Not Available | Positive | 1673688 - 1675028 | 47364.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
