Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative selenate abc transporter substrate-binding protein | CKY39_RS07505 | Not Available | Negative | 1653392 - 1654255 | 30717.9 |
| selenide, water dikinase seld | CKY39_RS07510 | Not Available | Positive | 1654367 - 1655446 | 36857.9 |
| abc transporter permease | CKY39_RS07515 | Not Available | Positive | 1655608 - 1658124 | 88975.5 |
| aaa family atpase | CKY39_RS07520 | Not Available | Positive | 1658231 - 1659715 | 53818.9 |
| lysr family transcriptional regulator | CKY39_RS07525 | Not Available | Negative | 1659737 - 1660657 | 33726.8 |
| mfs transporter | CKY39_RS07530 | Not Available | Positive | 1660786 - 1662312 | 51313.8 |
| lysr family transcriptional regulator | CKY39_RS07535 | Not Available | Negative | 1662332 - 1663231 | 32529.2 |
| sdr family oxidoreductase | CKY39_RS07540 | Not Available | Positive | 1663356 - 1664114 | 25926.9 |
| duf1097 domain-containing protein | CKY39_RS07545 | Not Available | Positive | 1664151 - 1664651 | 17165.6 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS07550 | Not Available | Positive | 1664702 - 1665595 | 31372.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
