Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate abc transporter permease subunit | CKY39_RS07455 | Not Available | Positive | 1643997 - 1644686 | 24083.8 |
| molybdate abc transporter substrate-binding protein | CKY39_RS07460 | Not Available | Positive | 1644715 - 1645464 | 26227.6 |
| abc transporter atp-binding protein | CKY39_RS07465 | Not Available | Positive | 1645461 - 1646252 | 28958.0 |
| fdhf/ydep family oxidoreductase | CKY39_RS07470 | Not Available | Positive | 1646333 - 1648675 | 85834.9 |
| hypothetical protein | CKY39_RS07475 | Not Available | Positive | 1648672 - 1648962 | 10004.9 |
| formate dehydrogenase accessory sulfurtransferase fdhd | CKY39_RS07480 | Not Available | Positive | 1648982 - 1649887 | 31758.3 |
| trna 2-selenouridine(34) synthase mnmh | CKY39_RS07485 | Not Available | Negative | 1649824 - 1650891 | 39167.9 |
| phosphonate abc transporter, permease protein phne | CKY39_RS07490 | Not Available | Negative | 1650927 - 1651724 | 27788.6 |
| phne/ptxc family abc transporter permease | CKY39_RS07495 | Not Available | Negative | 1651721 - 1652557 | 29052.4 |
| phosphonate abc transporter atp-binding protein | CKY39_RS07500 | Not Available | Negative | 1652554 - 1653378 | 28559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
