Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20 aminoacylase family protein | CKY39_RS07415 | Not Available | Positive | 1634996 - 1636177 | 42045.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34145 | Not Available | Positive | 1636265 - 1637329 | 37757.9 |
| m20 family metallo-hydrolase | CKY39_RS34150 | Not Available | Positive | 1637444 - 1638649 | 42795.1 |
| patatin-like phospholipase family protein | CKY39_RS07425 | Not Available | Negative | 1638681 - 1639886 | 42791.8 |
| iron-sulfur cluster carrier protein apbc | CKY39_RS07430 | Not Available | Positive | 1640017 - 1641084 | 37398.4 |
| lysr family transcriptional regulator | CKY39_RS07435 | Not Available | Positive | 1641160 - 1642110 | 34272.9 |
| winged helix-turn-helix domain-containing protein | CKY39_RS07440 | Not Available | Positive | 1642163 - 1642510 | 12171.8 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | CKY39_RS07445 | Not Available | Positive | 1642507 - 1643004 | 18297.9 |
| nitroreductase family protein | CKY39_RS07450 | Not Available | Negative | 1642965 - 1643645 | 24950.8 |
| hypothetical protein | CKY39_RS34155 | Not Available | Negative | 1643642 - 1643881 | 8735.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
