Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caib/baif coa transferase family protein | CKY39_RS07365 | Not Available | Negative | 1625316 - 1626515 | 42548.0 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS07370 | Not Available | Negative | 1626512 - 1627486 | 33445.1 |
| enoyl-coa hydratase/isomerase family protein | CKY39_RS07375 | Not Available | Negative | 1627529 - 1628284 | 27296.9 |
| gntr family transcriptional regulator | CKY39_RS07380 | Not Available | Positive | 1628343 - 1629014 | 24397.5 |
| methionine--trna ligase | CKY39_RS07385 | Not Available | Negative | 1629035 - 1631131 | 76706.5 |
| isocitrate/isopropylmalate dehydrogenase family protein | CKY39_RS07390 | Not Available | Positive | 1631358 - 1632389 | 36208.8 |
| phosphodiester glycosidase family protein | CKY39_RS07395 | Not Available | Positive | 1632413 - 1633138 | 26154.8 |
| yceh family protein | CKY39_RS07400 | Not Available | Positive | 1633186 - 1633887 | 24596.5 |
| hypothetical protein | CKY39_RS07405 | Not Available | Positive | 1633972 - 1634427 | 16216.9 |
| lrp/asnc family transcriptional regulator | CKY39_RS07410 | Not Available | Negative | 1634434 - 1634907 | 17676.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
