Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase | CKY39_RS07315 | Not Available | Negative | 1615834 - 1616472 | 23178.7 |
| pantoate--beta-alanine ligase | CKY39_RS07320 | Not Available | Negative | 1616469 - 1617311 | 31117.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CKY39_RS07325 | Not Available | Negative | 1617331 - 1618236 | 31488.3 |
| l-aspartate oxidase | CKY39_RS07330 | Not Available | Negative | 1618309 - 1619892 | 57146.0 |
| segregation and condensation protein a | CKY39_RS07335 | Not Available | Negative | 1619913 - 1620749 | 31866.0 |
| duf3460 family protein | CKY39_RS07340 | Not Available | Negative | 1620818 - 1621024 | 8227.83 |
| outer membrane protein assembly factor bame | CKY39_RS07345 | Not Available | Positive | 1621064 - 1621567 | 18642.4 |
| sulp family inorganic anion transporter | CKY39_RS07350 | Not Available | Negative | 1621571 - 1623250 | 59264.7 |
| enoyl-coa hydratase-related protein | CKY39_RS07355 | Not Available | Positive | 1623385 - 1625097 | 61253.3 |
| hypothetical protein | CKY39_RS07360 | Not Available | Negative | 1625105 - 1625329 | 6987.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
