Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hesa/moeb/thif family protein | CKY39_RS07265 | Not Available | Negative | 1607815 - 1608579 | 26731.0 |
| s41 family peptidase | CKY39_RS07270 | Not Available | Negative | 1608662 - 1610104 | 52323.7 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | CKY39_RS07275 | Not Available | Negative | 1610228 - 1610971 | 27716.8 |
| rhodanese-like domain-containing protein | CKY39_RS07280 | Not Available | Positive | 1611053 - 1611460 | 14324.7 |
| glutaredoxin 3 | CKY39_RS07285 | Not Available | Positive | 1611481 - 1611741 | 9496.67 |
| protein-export chaperone secb | CKY39_RS07290 | Not Available | Positive | 1611870 - 1612334 | 16872.2 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | CKY39_RS07295 | Not Available | Positive | 1612363 - 1613397 | 34979.2 |
| carboxylating nicotinate-nucleotide diphosphorylase | CKY39_RS07300 | Not Available | Positive | 1613419 - 1614297 | 30846.1 |
| quinolinate synthase nada | CKY39_RS07305 | Not Available | Positive | 1614304 - 1615419 | 39830.7 |
| 6-carboxytetrahydropterin synthase | CKY39_RS07310 | Not Available | Negative | 1615430 - 1615792 | 13866.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
