Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis regulatory protein kinase ubib | CKY39_RS07165 | Not Available | Positive | 1590340 - 1591905 | 59713.3 |
| sodium:solute symporter family protein | CKY39_RS07170 | Not Available | Positive | 1591925 - 1593373 | 51980.2 |
| fmdb family zinc ribbon protein | CKY39_RS07175 | Not Available | Positive | 1593479 - 1593820 | 11069.7 |
| duf502 domain-containing protein | CKY39_RS07180 | Not Available | Positive | 1593835 - 1594467 | 23046.3 |
| aspartate--trna ligase | CKY39_RS07185 | Not Available | Positive | 1594505 - 1596310 | 67195.9 |
| dihydroneopterin triphosphate diphosphatase | CKY39_RS07190 | Not Available | Positive | 1596318 - 1596794 | 17765.8 |
| endonuclease/exonuclease/phosphatase family protein | CKY39_RS07195 | Not Available | Positive | 1596791 - 1597561 | 28787.6 |
| gtp cyclohydrolase i | CKY39_RS07200 | Not Available | Positive | 1597635 - 1598366 | 27686.6 |
| bluf domain-containing protein | CKY39_RS07205 | Not Available | Positive | 1598370 - 1598792 | 15367.6 |
| dmt family transporter | CKY39_RS07210 | Not Available | Positive | 1598809 - 1599690 | 31785.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
